script_maker2000

Contents:

  • Installation Guide
  • How does this program work?
  • Command-line interface
  • GUI
  • Developer section
  • Modules
    • script_maker2000.cli
    • script_maker2000.crest
    • script_maker2000.files
    • script_maker2000.orca
    • script_maker2000.slurm
    • script_maker2000.template
script_maker2000
  • Modules
  • View page source

Modules

  • script_maker2000.cli
    • enable_profiling()
    • extract_zipfile()
    • find_json_files()
    • load_and_update_config()
    • open_browser()
    • prepare_extract_path()
    • update_mol_json()
  • script_maker2000.crest
    • CrestModule
      • CrestModule.check_result_integrity()
      • CrestModule.create_slurm_script()
      • CrestModule.run_job()
  • script_maker2000.files
    • add_dir_to_config()
    • add_premade_config()
    • automatic_ressource_allocation()
    • change_entry_in_batch_config()
    • check_config()
    • check_dir_in_batch_config()
    • check_input_files()
    • collect_input_files()
    • collect_results_()
    • collect_xyz_files_to_dict()
    • create_working_dir_structure()
    • open_dir_in_explorer()
    • read_batch_config_file()
    • read_config()
    • read_mol_input_json()
    • read_premade_config()
    • remove_premade_config()
    • replace_empty_with_empty_string()
    • return_user_config_dir()
  • script_maker2000.orca
    • OrcaModule
      • OrcaModule.check_job_status()
      • OrcaModule.collect_results()
      • OrcaModule.create_orca_input_files()
      • OrcaModule.create_slurm_scripts()
      • OrcaModule.prepare_jobs()
      • OrcaModule.prepare_slurm_script()
      • OrcaModule.read_xyzs()
      • OrcaModule.restart_jobs()
      • OrcaModule.run_job()
      • OrcaModule.write_orca_scripts()
  • script_maker2000.slurm
    • Slurm_Script
      • Slurm_Script.ceate_slurm_config()
      • Slurm_Script.submit_slurm_script()
  • script_maker2000.template
    • TemplateModule
      • TemplateModule.check_job_status()
      • TemplateModule.collect_results()
      • TemplateModule.create_internal_config()
      • TemplateModule.create_slurm_scripts()
      • TemplateModule.prepare_jobs()
      • TemplateModule.restart_jobs()
      • TemplateModule.run_job()
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